fermi-lite.git
5 years agoTry to take over patches from libSeqLib which needs separate bfc.h
Andreas Tille [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
Try to take over patches from libSeqLib which needs separate bfc.h

Last-Update: Thu, 02 Feb 2017 10:57:56 +0100

 FIXME: Please check the FIXME at the end.  I think I did things wrong to put a
        static declaration into header file but I had no better idea to make
        ec1buf_init known in libSeqLib

Gbp-Pq: Name bcf_seqlib.patch

5 years agoAvoid name space conflict with bwa
Andreas Tille [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
Avoid name space conflict with bwa

Bug-Upstream: https://github.com/lh3/fermi-lite/issues/5
Last-Update: Thu, 02 Feb 2017 10:57:56 +0100

Gbp-Pq: Name rename_bseq1_t.patch

5 years agoadd hardening flags
Sascha Steinbiss [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
add hardening flags

Last-Update: 2016-01-08

Adds necessary build flags for hardening.

Gbp-Pq: Name hardening

5 years agobuild shared library
Sascha Steinbiss [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
build shared library

Last-Update: 2016-01-08

Upstream only builds a static library, this adds a shared one.

Gbp-Pq: Name make_shared_lib

5 years agofermi-lite (0.1+git20190320.b499514-1) unstable; urgency=medium
Andreas Tille [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
fermi-lite (0.1+git20190320.b499514-1) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * Team upload.
  * Switch to upstream HEAD using gitmode in watch file
  * Remove trailing whitespace in debian/changelog (routine-update)
  * Use the libsimde-dev package instead of our code copy

  [ Andreas Tille ]
  * Standards-Version: 4.5.1 (routine-update)
  * debhelper-compat 13 (routine-update)

[dgit import unpatched fermi-lite 0.1+git20190320.b499514-1]

5 years agoImport fermi-lite_0.1+git20190320.b499514.orig.tar.xz
Andreas Tille [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
Import fermi-lite_0.1+git20190320.b499514.orig.tar.xz

[dgit import orig fermi-lite_0.1+git20190320.b499514.orig.tar.xz]

5 years agoImport fermi-lite_0.1+git20190320.b499514-1.debian.tar.xz
Andreas Tille [Fri, 8 Jan 2021 09:47:39 +0000 (10:47 +0100)]
Import fermi-lite_0.1+git20190320.b499514-1.debian.tar.xz

[dgit import tarball fermi-lite 0.1+git20190320.b499514-1 fermi-lite_0.1+git20190320.b499514-1.debian.tar.xz]